Gene detail

Detailed information of evm.model.Contig136.110 in Hemicorallium imperiale

Genomic Location: Contig136:273536...275077
NR annotation: HIU22137.1, ribonuclease R [Candidatus Fimihabitans intestinipullorum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O32231	Ribonuclease R OS=Bacillus subtilis (strain 168) OX=224308 GN=rnr PE=1 SV=1
Q9CH00	Ribonuclease R 1 OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=rnr1 PE=3 SV=1
Q98QL0	Ribonuclease R OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=rnr PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00773	RNB	RNB domain	Domain	Interproscan
PF08206	OB_RNB	Ribonuclease B OB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001900	Domain	Ribonuclease II/R	Interproscan
IPR050180	Family	RNR Ribonuclease	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR011129	Domain	Cold shock domain	Interproscan
IPR013223	Domain	Ribonuclease B, N-terminal OB domain	Interproscan
IPR004476	Family	Ribonuclease II/ribonuclease R	Interproscan
IPR022966	Conserved_site	Ribonuclease II/R, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23355	RIBONUCLEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0016070	Biological Process	RNA metabolic process	Interproscan