Detailed information of evm.model.Contig136.125 in Hemicorallium imperiale

Genomic Location: Contig136:310832...313285
NR annotation: OCN03951.1, DNA gyrase subunit A [Erysipelotrichaceae bacterium MTC7]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig136.125 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0C0R0DNA gyrase subunit A OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=gyrA PE=3 SV=1
Q5HK04DNA gyrase subunit A OS=Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A) OX=176279 GN=gyrA PE=3 SV=1
Q5HJZ0DNA gyrase subunit A OS=Staphylococcus aureus (strain COL) OX=93062 GN=gyrA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011147 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00521
all species →		DNA_topoisoIVDNA gyrase/topoisomerase IV, subunit AFamilyInterproscan
PF03989
all species →		DNA_gyraseA_CDNA gyrase C-terminal domain, beta-propellerRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002205
all species →		DomainDNA topoisomerase, type IIA, domain AInterproscan
IPR013760
all species →		Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan
IPR005743
all species →		FamilyDNA gyrase, subunit AInterproscan
IPR013758
all species →		Homologous_superfamilyDNA topoisomerase, type IIA, domain A, alpha-betaInterproscan
IPR013757
all species →		Homologous_superfamilyDNA topoisomerase, type IIA, alpha-helical domain superfamilyInterproscan
IPR035516
all species →		Homologous_superfamilyDNA gyrase/topoisomerase IV, subunit A, C-terminalInterproscan
IPR006691
all species →		RepeatDNA gyrase/topoisomerase IV, subunit A, C-terminal repeatInterproscan
IPR050220
all species →		FamilyType II DNA TopoisomerasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43493
all species →		DNA GYRASE/TOPOISOMERASE SUBUNIT AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003918
all species →		Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan
GO:0005694
all species →		Cellular ComponentchromosomeInterproscan
GO:0006259
all species →		Biological ProcessDNA metabolic processInterproscan
GO:0003916
all species →		Molecular FunctionDNA topoisomerase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0009330
all species →		Cellular ComponentDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02469gyrA; DNA gyrase subunit AEC:5.6.2.2
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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