Detailed information of evm.model.Contig136.151 in Hemicorallium imperiale

Genomic Location: Contig136:362907...363320
NR annotation: WP_070609582.1, 30S ribosomal protein S12 [Facklamia sp. HMSC062C11]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig136.151 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q839H1Small ribosomal subunit protein uS12 OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=rpsL PE=1 SV=1
A4IJI4Small ribosomal subunit protein uS12 OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=rpsL PE=3 SV=1
B1HMZ3Small ribosomal subunit protein uS12 OS=Lysinibacillus sphaericus (strain C3-41) OX=444177 GN=rpsL PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007343 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00164
all species →		Ribosom_S12_S23Ribosomal protein S12/S23FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005679
all species →		FamilyRibosomal protein uS12, bacterial-typeInterproscan
IPR006032
all species →		FamilySmall ribosomal subunit protein uS12Interproscan
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11652
all species →		30S RIBOSOMAL PROTEIN S12 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0015935
all species →		Cellular Componentsmall ribosomal subunitInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02950RP-S12, MRPS12, rpsL; small subunit ribosomal protein S12-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP