Detailed information of evm.model.Contig136.16 in Hemicorallium imperiale

Genomic Location: Contig136:23294...29512
NR annotation: WP_129736462.1, DNA-processing protein DprA [Massilimicrobiota timonensis]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig136.16 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8DPI7DNA processing protein DprA OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=dprA PE=1 SV=2
P0A2I2DNA topoisomerase 1 OS=Salmonella typhi OX=90370 GN=topA PE=3 SV=1
P0A2I1DNA topoisomerase 1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=topA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0021371 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01746
all species →		tRNA_m1G_MTtRNA (Guanine-1)-methyltransferaseFamilyInterproscan
PF02481
all species →		DNA_processg_ADNA recombination-mediator protein AFamilyInterproscan
PF01131
all species →		Topoisom_bacDNA topoisomeraseFamilyInterproscan
PF01245
all species →		Ribosomal_L19Ribosomal protein L19FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013825
all species →		Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 2Interproscan
IPR000380
all species →		FamilyDNA topoisomerase, type IAInterproscan
IPR016009
all species →		DomaintRNA methyltransferase TRMD/TRM10-type domainInterproscan
IPR001857
all species →		FamilyLarge ribosomal subunit protein bL19Interproscan
IPR013826
all species →		Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 3Interproscan
IPR003602
all species →		DomainDNA topoisomerase, type IA, DNA-binding domainInterproscan
IPR003488
all species →		FamilyDNA recombination-mediator protein AInterproscan
IPR023405
all species →		Homologous_superfamilyDNA topoisomerase, type IA, core domainInterproscan
IPR013824
all species →		Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 1Interproscan
IPR029026
all species →		Homologous_superfamilytRNA (guanine-N1-)-methyltransferase, N-terminalInterproscan
IPR029028
all species →		Homologous_superfamilyAlpha/beta knot methyltransferasesInterproscan
IPR008991
all species →		Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR013497
all species →		DomainDNA topoisomerase, type IA, centralInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42785
all species →		DNA TOPOISOMERASE, TYPE IA, COREInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003917
all species →		Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0003916
all species →		Molecular FunctionDNA topoisomerase activityInterproscan
GO:0009294
all species →		Biological ProcessDNA-mediated transformationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig136.16.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP