Detailed information of evm.model.Contig136.176 in Hemicorallium imperiale

Genomic Location: Contig136:395449...395976
NR annotation: NOQ50439.1, hypothetical protein [Mycoplasmataceae bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig136.176 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q60369Putative threonylcarbamoyl-AMP synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0062 PE=3 SV=1
Q8D257Threonylcarbamoyl-AMP synthase OS=Wigglesworthia glossinidia brevipalpis OX=36870 GN=tsaC PE=3 SV=1
A7FNJ8Threonylcarbamoyl-AMP synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) OX=349747 GN=tsaC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005999 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01300
all species →		Sua5_yciO_yrdCTelomere recombinationFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006070
all species →		DomainThreonylcarbamoyl-AMP synthase-like domainInterproscan
IPR017945
all species →		Homologous_superfamilyDHBP synthase RibB-like alpha/beta domain superfamilyInterproscan
IPR050156
all species →		FamilyThreonylcarbamoyl-AMP synthase, SUA5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17490
all species →		SUA5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003725
all species →		Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006450
all species →		Biological Processregulation of translational fidelityInterproscan
GO:0016779
all species →		Molecular Functionnucleotidyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K07566tsaC, rimN, SUA5, YRDC; L-threonylcarbamoyladenylate synthaseEC:2.7.7.87
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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