Detailed information of evm.model.Contig136.230 in Hemicorallium imperiale

Genomic Location: Contig136:541941...542246
NR annotation: WP_024863523.1, asparagine--tRNA ligase [Williamsoniiplasma somnilux]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig136.230 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2SR42Asparagine--tRNA ligase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) OX=340047 GN=asnS PE=3 SV=1
Q6MUF2Asparagine--tRNA ligase OS=Mycoplasma mycoides subsp. mycoides SC (strain CCUG 32753 / NCTC 10114 / PG1) OX=272632 GN=asnS PE=3 SV=1
Q6F0Y5Asparagine--tRNA ligase OS=Mesoplasma florum (strain ATCC 33453 / NBRC 100688 / NCTC 11704 / L1) OX=265311 GN=asnS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002634 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00152
all species →		tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006195
all species →		DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR004364
all species →		DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22594
all species →		ASPARTYL/LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006421
all species →		Biological Processasparaginyl-tRNA aminoacylationInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig136.230.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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