Detailed information of evm.model.Contig136.48 in Hemicorallium imperiale

Genomic Location: Contig136:123333...125883
NR annotation: NMA49147.1, aspartate--tRNA ligase [Tissierellia bacterium]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig136.48 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C5D509Aspartate--tRNA(Asp/Asn) ligase OS=Geobacillus sp. (strain WCH70) OX=471223 GN=aspS PE=3 SV=1
B7GFR1Aspartate--tRNA(Asp/Asn) ligase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) OX=491915 GN=aspS PE=3 SV=1
A9VIM8Aspartate--tRNA(Asp/Asn) ligase OS=Bacillus mycoides (strain KBAB4) OX=315730 GN=aspS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0015669 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01336
all species →		tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF00152
all species →		tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF00456
all species →		Transketolase_NTransketolase, thiamine diphosphate binding domainDomainInterproscan
PF02938
all species →		GADGAD domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR004115
all species →		Homologous_superfamilyGAD-like domain superfamilyInterproscan
IPR047090
all species →		DomainAspartate-tRNA ligase, type 1, core domainInterproscan
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR029061
all species →		Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR006195
all species →		DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR004365
all species →		DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR004524
all species →		FamilyAspartate-tRNA ligase, type 1Interproscan
IPR004364
all species →		DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR002312
all species →		FamilyAspartyl/Asparaginyl-tRNA synthetase, class IIbInterproscan
IPR005474
all species →		DomainTransketolase, N-terminalInterproscan
IPR029351
all species →		DomainGAD domainInterproscan
IPR047089
all species →		DomainAspartate-tRNA ligase, type 1, anticodon recognition domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22594
all species →		ASPARTYL/LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0016874
all species →		Molecular Functionligase activityInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004815
all species →		Molecular Functionaspartate-tRNA ligase activityInterproscan
GO:0006422
all species →		Biological Processaspartyl-tRNA aminoacylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01876DARS2, aspS; aspartyl-tRNA synthetaseEC:6.1.1.12
Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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