Detailed information of evm.model.Contig136.82 in Hemicorallium imperiale

Genomic Location: Contig136:203145...204306
NR annotation: MBQ6495159.1, ribosome small subunit-dependent GTPase A [Bacilli bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig136.82 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8EUL6Small ribosomal subunit biogenesis GTPase RsgA OS=Malacoplasma penetrans (strain HF-2) OX=272633 GN=rsgA PE=3 SV=1
Q9PQS5Small ribosomal subunit biogenesis GTPase RsgA OS=Ureaplasma parvum serovar 3 (strain ATCC 700970) OX=273119 GN=rsgA PE=3 SV=2
Q819U6Small ribosomal subunit biogenesis GTPase RsgA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=rsgA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0024590 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03193
all species →		RsgA_GTPaseRsgA GTPaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR030378
all species →		DomainCircularly permuted (CP)-type guanine nucleotide-binding (G) domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010914
all species →		DomainRsgA GTPase domainInterproscan
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR004881
all species →		FamilyRibosome biogenesis GTPase RsgAInterproscan
IPR025662
all species →		Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32120
all species →		SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06949rsgA, engC; ribosome biogenesis GTPase / thiamine phosphate phosphataseEC:3.6.1.-
EC:3.1.3.100
Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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