Detailed information of evm.model.Contig139.13 in Hemicorallium imperiale

Genomic Location: Contig139:20779...23387
NR annotation: OED34142.1, hypothetical protein AB834_07165 [PVC group bacterium (ex Bugula neritina AB1)]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig139.13 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P31741Type II secretion system protein E OS=Aeromonas hydrophila OX=644 GN=exeE PE=3 SV=1
Q01566Type II secretion system protein E OS=Dickeya dadantii (strain 3937) OX=198628 GN=outE PE=3 SV=2
P15645Type II secretion system protein E OS=Klebsiella pneumoniae OX=573 GN=pulE PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011531 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00482
all species →		T2SSFType II secretion system (T2SS), protein FDomainInterproscan
PF00437
all species →		T2SSEType II/IV secretion system proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042094
all species →		Homologous_superfamilyType II secretion system GspF domain superfamilyInterproscan
IPR018076
all species →		DomainType II secretion system protein GspF domainInterproscan
IPR001482
all species →		DomainType II/IV secretion system domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003004
all species →		FamilyGspF/PilC familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30258
all species →		TYPE II SECRETION SYSTEM PROTEIN GSPE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig139.13.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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