Detailed information of evm.model.Contig139.20 in Hemicorallium imperiale

Genomic Location: Contig139:37493...39843
NR annotation: OED36041.1, DNA mismatch repair protein MutS [PVC group bacterium (ex Bugula neritina AB1)]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig139.20 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q46CE2DNA mismatch repair protein MutS OS=Methanosarcina barkeri (strain Fusaro / DSM 804) OX=269797 GN=mutS PE=3 SV=1
B8CX98DNA mismatch repair protein MutS OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=mutS PE=3 SV=1
Q67NK1DNA mismatch repair protein MutS OS=Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T) OX=292459 GN=mutS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005817 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05192
all species →		MutS_IIIMutS domain IIIDomainInterproscan
PF05190
all species →		MutS_IVMutS family domain IVDomainInterproscan
PF01624
all species →		MutS_IMutS domain IDomainInterproscan
PF05188
all species →		MutS_IIMutS domain IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007696
all species →		DomainDNA mismatch repair protein MutS, coreInterproscan
IPR007861
all species →		DomainDNA mismatch repair protein MutS, clampInterproscan
IPR016151
all species →		Homologous_superfamilyDNA mismatch repair protein MutS, N-terminalInterproscan
IPR036678
all species →		Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR036187
all species →		Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR007695
all species →		DomainDNA mismatch repair protein MutS-like, N-terminalInterproscan
IPR007860
all species →		DomainDNA mismatch repair protein MutS, connector domainInterproscan
IPR045076
all species →		FamilyDNA mismatch repair MutS familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361
all species →		DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006298
all species →		Biological Processmismatch repairInterproscan
GO:0030983
all species →		Molecular Functionmismatched DNA bindingInterproscan
GO:0003690
all species →		Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0140664
all species →		Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig139.20.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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