Detailed information of evm.model.Contig139.5 in Hemicorallium imperiale

Genomic Location: Contig139:5732...7438
NR annotation: OED34839.1, threonine--tRNA ligase [PVC group bacterium (ex Bugula neritina AB1)]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C6BRH1Threonine--tRNA ligase OS=Maridesulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIMB 8403 / VKM B-1763) OX=526222 GN=thrS PE=3 SV=1
A1ARE5Threonine--tRNA ligase OS=Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1) OX=338966 GN=thrS PE=3 SV=1
Q3A4P3Threonine--tRNA ligase OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=thrS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002320FamilyThreonine-tRNA ligase, class IIaInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR047246DomainThreonine-tRNA ligase, class IIa, anticodon-binding domainInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR033728DomainThreonine-tRNA ligase catalytic core domainInterproscan
IPR004154DomainAnticodon-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11451THREONINE-TRNA LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004829Molecular Functionthreonine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006435Biological Processthreonyl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01868TARS, thrS; threonyl-tRNA synthetaseEC:6.1.1.3
Transfer RNA biogenesisko03016deepkoala

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