Detailed information of evm.model.Contig147.1 in Hemicorallium imperiale

Genomic Location: not available for this species
NR annotation: CAA0079094.1, Arabinose 5-phosphate isomerase KdsD [BD1-7 clade bacterium]
Species abbreviation HIMPE · all data for this species · gene families

 Sequence
No sequence record for evm.model.Contig147.1 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9HVW0Arabinose 5-phosphate isomerase KdsD OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=kdsD PE=1 SV=1
Q8X9J0Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli O157:H7 OX=83334 GN=kdsD PE=3 SV=1
Q83JF4Arabinose 5-phosphate isomerase KdsD OS=Shigella flexneri OX=623 GN=kdsD PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010226 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01380
all species →		SISSIS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001347
all species →		DomainSIS domainInterproscan
IPR035474
all species →		DomainKpsF-like, SIS domainInterproscan
IPR046342
all species →		Homologous_superfamilyCBS domain superfamilyInterproscan
IPR046348
all species →		Homologous_superfamilySIS domain superfamilyInterproscan
IPR050986
all species →		FamilySIS family GutQ/KpsF subfamily isomerasesInterproscan
IPR004800
all species →		FamilyPhosphosugar isomerase, KdsD/KpsF-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42745
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0097367
all species →		Molecular Functioncarbohydrate derivative bindingInterproscan
GO:1901135
all species →		Biological Processcarbohydrate derivative metabolic processInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0016853
all species →		Molecular Functionisomerase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06041kdsD, kpsF; arabinose-5-phosphate isomeraseEC:5.3.1.13
Lipopolysaccharide biosynthesis proteinsko01005deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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