Detailed information of evm.model.Contig40.16 in Hemicorallium imperiale

Genomic Location: Contig40:48708...52786
NR annotation: OED34313.1, replicative DNA helicase [PVC group bacterium (ex Bugula neritina AB1)]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9X4C9Replicative DNA helicase DnaB OS=Geobacillus stearothermophilus OX=1422 GN=dnaB PE=1 SV=1
P37469Replicative DNA helicase DnaC OS=Bacillus subtilis (strain 168) OX=224308 GN=dnaC PE=1 SV=2
Q6ABX1Replicative DNA helicase DnaB OS=Leifsonia xyli subsp. xyli (strain CTCB07) OX=281090 GN=dnaB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012386 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03796
all species →		DnaB_CDnaB-like helicase C terminal domainDomainInterproscan
PF00772
all species →		DnaBDnaB-like helicase N terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan
IPR007694
all species →		DomainDNA helicase, DnaB-like, C-terminalInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR016136
all species →		Homologous_superfamilyDNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminalInterproscan
IPR007692
all species →		FamilyDNA helicase, DnaB typeInterproscan
IPR036185
all species →		Homologous_superfamilyDNA helicase, DnaB-like, N-terminal domain superfamilyInterproscan
IPR007693
all species →		DomainDNA helicase, DnaB-like, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30153
all species →		REPLICATIVE DNA HELICASE DNABInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006268
all species →		Biological ProcessDNA unwinding involved in DNA replicationInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig40.16.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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