Detailed information of evm.model.Contig40.19 in Hemicorallium imperiale

Genomic Location: Contig40:55643...58239
NR annotation: OED34320.1, phosphoribosylpyrophosphate synthetase [PVC group bacterium (ex Bugula neritina AB1)]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6AJL7Ribose-phosphate pyrophosphokinase OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) OX=177439 GN=prs PE=3 SV=1
Q7M8J0Ribose-phosphate pyrophosphokinase OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / CCUG 13145 / JCM 31913 / LMG 7466 / NCTC 11488 / FDC 602W) OX=273121 GN=prs PE=3 SV=1
Q8R753Ribose-phosphate pyrophosphokinase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=prs PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13793Pribosyltran_NN-terminal domain of ribose phosphate pyrophosphokinaseDomainInterproscan
PF00483NTP_transferaseNucleotidyl transferaseFamilyInterproscan
PF01386Ribosomal_L25pRibosomal L25p familyDomainInterproscan
PF14572Pribosyl_synthPhosphoribosyl synthetase-associated domainDomainInterproscan
PF14693Ribosomal_TL5_CRibosomal protein TL5, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001021FamilyRibosomal protein bL25, long-formInterproscan
IPR029099DomainRibose-phosphate pyrophosphokinase, N-terminal domainInterproscan
IPR005835DomainNucleotidyl transferase domainInterproscan
IPR037515FamilyRibose-phosphate pyrophosphokinase, bacterial-typeInterproscan
IPR029057Homologous_superfamilyPhosphoribosyltransferase-likeInterproscan
IPR037121Homologous_superfamilyLarge ribosomal subunit protein bL25, C-terminalInterproscan
IPR000842Conserved_sitePhosphoribosyl pyrophosphate synthetase, conserved siteInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR005946FamilyRibose-phosphate pyrophosphokinaseInterproscan
IPR029751DomainLarge ribosomal subunit protein bL25, L25 domainInterproscan
IPR020056Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalInterproscan
IPR011035Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyInterproscan
IPR020057DomainLarge ribosomal subunit protein bL25, beta domainInterproscan
IPR000836DomainPhosphoribosyltransferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10210RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0008097Molecular Function5S rRNA bindingInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0004749Molecular Functionribose phosphate diphosphokinase activityInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0009156Biological Processribonucleoside monophosphate biosynthetic processInterproscan
GO:0044249Biological Processobsolete cellular biosynthetic processInterproscan
GO:0002189Cellular Componentribose phosphate diphosphokinase complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006015Biological Process5-phosphoribose 1-diphosphate biosynthetic processInterproscan
GO:0006164Biological Processpurine nucleotide biosynthetic processInterproscan
GO:0009165Biological Processnucleotide biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03723mfd; transcription-repair coupling factor (superfamily II helicase)EC:5.6.2.4
DNA repair and recombination proteinsko03400deepkoala

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