Gene detail

Detailed information of evm.model.Contig43.13 in Hemicorallium imperiale

Genomic Location: Contig43:16152...17810
NR annotation: CAA0114560.1, 60 kDa chaperonin [BD1-7 clade bacterium]
Species abbreviation HIMPE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Contig43.13 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B3PLM6	Chaperonin GroEL OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=groEL PE=3 SV=1
C5BP08	Chaperonin GroEL OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=groEL PE=3 SV=1
Q21MD3	Chaperonin GroEL OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=groEL PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006424 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00118 all species →	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001844 all species →	Family	Chaperonin Cpn60/GroEL	Interproscan
IPR027413 all species →	Homologous_superfamily	GroEL-like equatorial domain superfamily	Interproscan
IPR027409 all species →	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR027410 all species →	Homologous_superfamily	TCP-1-like chaperonin intermediate domain superfamily	Interproscan
IPR002423 all species →	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan
IPR018370 all species →	Conserved_site	Chaperonin Cpn60, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45633 all species →	60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042026 all species →	Biological Process	protein refolding	Interproscan
GO:0140662 all species →	Molecular Function	ATP-dependent protein folding chaperone	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0009408 all species →	Biological Process	response to heat	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0051085 all species →	Biological Process	chaperone cofactor-dependent protein refolding	Interproscan
GO:1990220 all species →	Cellular Component	GroEL-GroES complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04077	groEL, HSPD1; chaperonin GroEL	EC:5.6.1.7	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.