Detailed information of evm.model.Contig43.15 in Hemicorallium imperiale

Genomic Location: Contig43:18972...20234
NR annotation: CAA0114524.1, UDP-N-acetylglucosamine 1-carboxyvinyltransferase [BD1-7 clade bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig43.15 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q21FV2UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=murA PE=3 SV=1
A4XQN4UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=murA PE=3 SV=1
Q4KI75UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=murA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010444 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00275
all species →		EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036968
all species →		Homologous_superfamilyEnolpyruvate transferase domain superfamilyInterproscan
IPR013792
all species →		Homologous_superfamilyRNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaInterproscan
IPR005750
all species →		FamilyUDP-N-acetylglucosamine 1-carboxyvinyltransferaseInterproscan
IPR050068
all species →		FamilyUDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA subfamilyInterproscan
IPR001986
all species →		DomainEnolpyruvate transferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43783
all species →		UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016765
all species →		Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0008760
all species →		Molecular FunctionUDP-N-acetylglucosamine 1-carboxyvinyltransferase activityInterproscan
GO:0019277
all species →		Biological ProcessUDP-N-acetylgalactosamine biosynthetic processInterproscan
GO:0009252
all species →		Biological Processpeptidoglycan biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00790murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferaseEC:2.5.1.7
Peptidoglycan biosynthesis and degradation proteinsko01011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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