Detailed information of evm.model.Contig43.17 in Hemicorallium imperiale

Genomic Location: Contig43:22255...23328
NR annotation: CAA0083665.1, Serine endoprotease DegS [BD1-7 clade bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig43.17 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D0ZY51Serine endoprotease DegS OS=Salmonella typhimurium (strain 14028s / SGSC 2262) OX=588858 GN=degS PE=3 SV=1
A5W8F5Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1) OX=351746 GN=Pput_4291 PE=3 SV=1
B0KV30Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas putida (strain GB-1) OX=76869 GN=PputGB1_4377 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002592 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13180
all species →		PDZ_2PDZ domainDomainInterproscan
PF13365
all species →		Trypsin_2Trypsin-like peptidase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →		DomainPDZ domainInterproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR009003
all species →		Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR051201
all species →		FamilyChloroplastic and Bacterial Serine ProteasesInterproscan
IPR001940
all species →		FamilyPeptidase S1CInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43343
all species →		PEPTIDASE S12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0004252
all species →		Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04691hhoB, degS; serine protease DegSEC:3.4.21.-
Peptidases and inhibitorsko01002deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP