Detailed information of evm.model.Contig5.47 in Hemicorallium imperiale

Genomic Location: Contig5:83681...84616
NR annotation: CAA0081013.1, Ribose-phosphate pyrophosphokinase [BD1-7 clade bacterium]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig5.47 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q888C6Ribose-phosphate pyrophosphokinase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=prs PE=3 SV=1
Q88PX6Ribose-phosphate pyrophosphokinase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=prs PE=3 SV=1
Q9HVC5Ribose-phosphate pyrophosphokinase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=prs PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001449 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14572
all species →		Pribosyl_synthPhosphoribosyl synthetase-associated domainDomainInterproscan
PF13793
all species →		Pribosyltran_NN-terminal domain of ribose phosphate pyrophosphokinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005946
all species →		FamilyRibose-phosphate pyrophosphokinaseInterproscan
IPR037515
all species →		FamilyRibose-phosphate pyrophosphokinase, bacterial-typeInterproscan
IPR029057
all species →		Homologous_superfamilyPhosphoribosyltransferase-likeInterproscan
IPR000836
all species →		DomainPhosphoribosyltransferase domainInterproscan
IPR029099
all species →		DomainRibose-phosphate pyrophosphokinase, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10210
all species →		RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000287
all species →		Molecular Functionmagnesium ion bindingInterproscan
GO:0004749
all species →		Molecular Functionribose phosphate diphosphokinase activityInterproscan
GO:0009165
all species →		Biological Processnucleotide biosynthetic processInterproscan
GO:0002189
all species →		Cellular Componentribose phosphate diphosphokinase complexInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006015
all species →		Biological Process5-phosphoribose 1-diphosphate biosynthetic processInterproscan
GO:0006164
all species →		Biological Processpurine nucleotide biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00948PRPS, prsA; ribose-phosphate pyrophosphokinaseEC:2.7.6.1
Purine metabolismko00230deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP