Detailed information of evm.model.Contig5.50 in Hemicorallium imperiale

Genomic Location: Contig5:88136...90511
NR annotation: CAA0079404.1, Peptide chain release factor RF1 [BD1-7 clade bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig5.50 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q21FM3Peptide chain release factor 1 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=prfA PE=3 SV=1
C5BSZ6Peptide chain release factor 1 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=prfA PE=3 SV=1
A6W1C2Peptide chain release factor 1 OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=prfA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002637 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00472
all species →		RF-1RF-1 domainFamilyInterproscan
PF05201
all species →		GlutR_NGlutamyl-tRNAGlu reductase, N-terminal domainDomainInterproscan
PF03462
all species →		PCRFPCRF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036343
all species →		Homologous_superfamilyGlutamyl-tRNA reductase, N-terminal domain superfamilyInterproscan
IPR000352
all species →		DomainPeptide chain release factor class IInterproscan
IPR000343
all species →		FamilyGlutamyl-tRNA reductaseInterproscan
IPR045853
all species →		Homologous_superfamilyPeptide chain release factor class I superfamilyInterproscan
IPR004373
all species →		FamilyPeptide chain release factor 1Interproscan
IPR015895
all species →		DomainGlutamyl-tRNA reductase, N-terminalInterproscan
IPR018214
all species →		Conserved_siteGlutamyl-tRNA reductase, conserved siteInterproscan
IPR050057
all species →		FamilyProkaryotic/Mitochondrial Release FactorInterproscan
IPR005139
all species →		DomainPeptide chain release factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43804
all species →		LD18447PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008883
all species →		Molecular Functionglutamyl-tRNA reductase activityInterproscan
GO:0033014
all species →		Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0050661
all species →		Molecular FunctionNADP bindingInterproscan
GO:0003747
all species →		Molecular Functiontranslation release factor activityInterproscan
GO:0006415
all species →		Biological Processtranslational terminationInterproscan
GO:0016149
all species →		Molecular Functiontranslation release factor activity, codon specificInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig5.50.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP