Detailed information of evm.model.Contig5.50 in Hemicorallium imperiale

Genomic Location: Contig5:88136...90511
NR annotation: CAA0079404.1, Peptide chain release factor RF1 [BD1-7 clade bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q21FM3Peptide chain release factor 1 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=prfA PE=3 SV=1
C5BSZ6Peptide chain release factor 1 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=prfA PE=3 SV=1
A6W1C2Peptide chain release factor 1 OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=prfA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00472RF-1RF-1 domainFamilyInterproscan
PF05201GlutR_NGlutamyl-tRNAGlu reductase, N-terminal domainDomainInterproscan
PF03462PCRFPCRF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036343Homologous_superfamilyGlutamyl-tRNA reductase, N-terminal domain superfamilyInterproscan
IPR000352DomainPeptide chain release factor class IInterproscan
IPR000343FamilyGlutamyl-tRNA reductaseInterproscan
IPR045853Homologous_superfamilyPeptide chain release factor class I superfamilyInterproscan
IPR004373FamilyPeptide chain release factor 1Interproscan
IPR015895DomainGlutamyl-tRNA reductase, N-terminalInterproscan
IPR018214Conserved_siteGlutamyl-tRNA reductase, conserved siteInterproscan
IPR050057FamilyProkaryotic/Mitochondrial Release FactorInterproscan
IPR005139DomainPeptide chain release factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43804LD18447PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008883Molecular Functionglutamyl-tRNA reductase activityInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0003747Molecular Functiontranslation release factor activityInterproscan
GO:0006415Biological Processtranslational terminationInterproscan
GO:0016149Molecular Functiontranslation release factor activity, codon specificInterproscan

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