Detailed information of evm.model.Contig73.2 in Hemicorallium imperiale

Genomic Location: Contig73:1595...2227
NR annotation: WP_273033820.1, tRNA (guanosine(46)-N7)-methyltransferase TrmB [Spongiibacter tropicus]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig73.2 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0VLC7tRNA (guanine-N(7)-)-methyltransferase OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) OX=393595 GN=trmB PE=3 SV=1
B8CS82tRNA (guanine-N(7)-)-methyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) OX=225849 GN=trmB PE=3 SV=1
Q2S8L4tRNA (guanine-N(7)-)-methyltransferase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=trmB PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0026028 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02390
all species →		Methyltransf_4Putative methyltransferase FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR003358
all species →		FamilytRNA (guanine-N-7) methyltransferase, Trmb typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23417
all species →		3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006400
all species →		Biological ProcesstRNA modificationInterproscan
GO:0008176
all species →		Molecular FunctiontRNA (guanine(46)-N7)-methyltransferase activityInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan
GO:0036265
all species →		Biological ProcessRNA (guanine-N7)-methylationInterproscan
GO:0043527
all species →		Cellular ComponenttRNA methyltransferase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03439trmB, METTL1, TRM8; tRNA (guanine-N7-)-methyltransferaseEC:2.1.1.33
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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