Detailed information of evm.model.HiC_scaffold_1.156 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1:2381101...2392736
NR annotation: CAB4006553.1, tigger transposable element-derived 6-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9R226KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Mus musculus OX=10090 GN=Khdrbs3 PE=1 SV=1
Q9JLP1KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Khdrbs3 PE=1 SV=1
O75525KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Homo sapiens OX=9606 GN=KHDRBS3 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHTH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF05225HTH_psqhelix-turn-helix, Psq domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

TOP