Detailed information of evm.model.HiC_scaffold_1.287 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1:3813305...3842140
NR annotation: XP_047128453.1, leucine-rich repeat serine/threonine-protein kinase 1-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9TZM3Leucine-rich repeat serine/threonine-protein kinase 1 OS=Caenorhabditis elegans OX=6239 GN=lrk-1 PE=1 SV=6
Q38SD2Leucine-rich repeat serine/threonine-protein kinase 1 OS=Homo sapiens OX=9606 GN=LRRK1 PE=1 SV=3
Q3UHC2Leucine-rich repeat serine/threonine-protein kinase 1 OS=Mus musculus OX=10090 GN=Lrrk1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF16095CORC-terminal of Roc, COR, domainFamilyInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR032171DomainC-terminal of Roc (COR) domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR020859DomainRoc domainInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24198ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

TOP