Detailed information of evm.model.HiC_scaffold_1.312 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1:4131344...4150204
NR annotation: XP_047128818.1, cytoplasmic tRNA 2-thiolation protein 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5FW05Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE=2 SV=1
Q803X1Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio OX=7955 GN=ctu1 PE=2 SV=1
Q05AW7Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis OX=8355 GN=ctu1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16503zn-ribbon_14Zinc-ribbonFamilyInterproscan
PF01171ATP_bind_3PP-loop familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR020554Conserved_siteUncharacterised protein family UPF0021, conserved siteInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR032442DomainCytoplasmic tRNA 2-thiolation protein 1, C-terminalInterproscan
IPR011063DomaintRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11807ATPASES OF THE PP SUPERFAMILY-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0002143Biological ProcesstRNA wobble position uridine thiolationInterproscan
GO:0002144Cellular Componentcytosolic tRNA wobble base thiouridylase complexInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

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