Detailed information of evm.model.HiC_scaffold_1.315 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1:4177175...4249567
NR annotation: XP_047128330.1, unconventional myosin-VI [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9I8D1Unconventional myosin-VI OS=Gallus gallus OX=9031 GN=MYO6 PE=1 SV=1
E1BPK6Unconventional myosin-VI OS=Bos taurus OX=9913 GN=MYO6 PE=1 SV=4
Q64331Unconventional myosin-VI OS=Mus musculus OX=10090 GN=Myo6 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyZBTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF00063Myosin_headMyosin head (motor domain)DomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF01363FYVEFYVE zinc fingerDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF21521MYO6_leverMyosin VI, lever armDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF16521Myosin-VI_CBDMyosin VI cargo binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001452DomainSH3 domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001609DomainMyosin head, motor domainInterproscan
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR000306DomainFYVE zinc fingerInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR049016DomainMyosin VI, lever armInterproscan
IPR036114DomainClass VI myosin, motor domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036961Homologous_superfamilyKinesin motor domain superfamilyInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032412DomainMyosin VI, cargo binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13140MYOSINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003774Molecular Functioncytoskeletal motor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016459Cellular Componentmyosin complexInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000146Molecular Functionmicrofilament motor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0007015Biological Processactin filament organizationInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0030050Biological Processvesicle transport along actin filamentInterproscan
GO:0030139Cellular Componentendocytic vesicleInterproscan
GO:0031982Cellular ComponentvesicleInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

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