Detailed information of evm.model.HiC_scaffold_1.325 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1:4394912...4406524
NR annotation: XP_047128955.1, ubiquitin carboxyl-terminal hydrolase 16-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q08DA3Ubiquitin carboxyl-terminal hydrolase 16 OS=Bos taurus OX=9913 GN=USP16 PE=2 SV=2
Q0VA64Ubiquitin carboxyl-terminal hydrolase 16 OS=Xenopus tropicalis OX=8364 GN=usp16 PE=2 SV=2
Q6PAW2Ubiquitin carboxyl-terminal hydrolase 16 OS=Xenopus laevis OX=8355 GN=usp16 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP
Ubiquitin FamilyUBD|ZnF|ZnF_UBP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

TOP