Detailed information of evm.model.HiC_scaffold_1.341 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1:4635917...4660360
NR annotation: XP_047127933.1, syntaxin-binding protein 5 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9WU70Syntaxin-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Stxbp5 PE=1 SV=1
Q5T5C0Syntaxin-binding protein 5 OS=Homo sapiens OX=9606 GN=STXBP5 PE=1 SV=1
Q8K400Syntaxin-binding protein 5 OS=Mus musculus OX=10090 GN=Stxbp5 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08366LLGLLLGL2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000664FamilyLethal(2) giant larvae proteinInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR042855Domainv-SNARE, coiled-coil homology domainInterproscan
IPR013577DomainLethal giant larvae homologue 2Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10241LETHAL 2 GIANT LARVAE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0017157Biological Processregulation of exocytosisInterproscan
GO:0019905Molecular Functionsyntaxin bindingInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0045159Molecular Functionmyosin II bindingInterproscan
GO:0050708Biological Processregulation of protein secretionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08518STXBP5, SRO7_77; syntaxin-binding protein 5-Membrane traffickingko04131deepkoala

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