Detailed information of evm.model.HiC_scaffold_10.136 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_10:1684434...1732916
NR annotation: XP_047145895.1, oxysterol-binding protein-related protein 1 isoform X3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91XL9Oxysterol-binding protein-related protein 1 OS=Mus musculus OX=10090 GN=Osbpl1a PE=1 SV=2
Q9BXW6Oxysterol-binding protein-related protein 1 OS=Homo sapiens OX=9606 GN=OSBPL1A PE=1 SV=2
Q8K4M9Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01974tRNA_int_endotRNA intron endonuclease, catalytic C-terminal domainDomainInterproscan
PF03399SAC3_GANPSAC3/GANP familyFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF01237Oxysterol_BPOxysterol-binding protein FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR006677DomaintRNA intron endonuclease, catalytic domain-likeInterproscan
IPR005062DomainSAC3/GANP/THP3, conserved domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR000648FamilyOxysterol-binding proteinInterproscan
IPR011856Homologous_superfamilytRNA endonuclease-like domain superfamilyInterproscan
IPR037239Homologous_superfamilyOxysterol-binding protein superfamilyInterproscan
IPR036167Homologous_superfamilytRNA intron endonuclease, catalytic domain-like superfamilyInterproscan
IPR018494Conserved_siteOxysterol-binding protein, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10972OXYSTEROL-BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000213Molecular FunctiontRNA-intron endonuclease activityInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008289Molecular Functionlipid bindingInterproscan
GO:0015248Molecular Functionobsolete sterol transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0032934Molecular Functionsterol bindingInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0097038Cellular Componentperinuclear endoplasmic reticulumInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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