Detailed information of evm.model.HiC_scaffold_10.141 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_10:1841671...1858855
NR annotation: XP_047126587.1, uncharacterized protein LOC100200373 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8BL74General transcription factor 3C polypeptide 2 OS=Mus musculus OX=10090 GN=Gtf3c2 PE=2 SV=2
Q5RDC3General transcription factor 3C polypeptide 2 OS=Pongo abelii OX=9601 GN=GTF3C2 PE=2 SV=1
Q8WUA4General transcription factor 3C polypeptide 2 OS=Homo sapiens OX=9606 GN=GTF3C2 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR052416FamilyGeneral transcription factor 3C componentInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15052RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR COMPLEX SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000127Cellular Componenttranscription factor TFIIIC complexInterproscan
GO:0006383Biological Processtranscription by RNA polymerase IIIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15200GTF3C2; general transcription factor 3C polypeptide 2-Transcription machineryko03021deepkoala

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