Detailed information of evm.model.HiC_scaffold_10.159 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_10:2037813...2060279
NR annotation: CAH3162714.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O00716Transcription factor E2F3 OS=Homo sapiens OX=9606 GN=E2F3 PE=1 SV=1
O35261Transcription factor E2F3 OS=Mus musculus OX=10090 GN=E2f3 PE=1 SV=2
Q14209Transcription factor E2F2 OS=Homo sapiens OX=9606 GN=E2F2 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyE2F

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16421E2F_CC-MBE2F transcription factor CC-MB domainDomainInterproscan
PF16769MCM3AP_GANPMCM3AP domain of GANPFamilyInterproscan
PF02319E2F_TDPE2F/DP family winged-helix DNA-binding domainDomainInterproscan
PF03399SAC3_GANPSAC3/GANP familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037241Homologous_superfamilyE2F-DP heterodimerization regionInterproscan
IPR015633FamilyE2F FamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR003316DomainE2F/DP family, winged-helix DNA-binding domainInterproscan
IPR032198DomainE2F transcription factor, CC-MB domainInterproscan
IPR031907DomainGerminal-centre associated nuclear protein, MCM3AP domainInterproscan
IPR005062DomainSAC3/GANP/THP3, conserved domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12081TRANSCRIPTION FACTOR E2FInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0090575Cellular ComponentRNA polymerase II transcription regulator complexInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

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