Detailed information of evm.model.HiC_scaffold_10.224 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_10:2846398...2852777
NR annotation: XP_020897286.1, uncharacterized protein LOC110236138 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4KM92Pseudouridylate synthase 1 homolog OS=Rattus norvegicus OX=10116 GN=Pus1 PE=1 SV=2
Q9WU56Pseudouridylate synthase 1 homolog OS=Mus musculus OX=10090 GN=Pus1 PE=1 SV=2
Q9Y606Pseudouridylate synthase 1 homolog OS=Homo sapiens OX=9606 GN=PUS1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01416PseudoU_synth_1tRNA pseudouridine synthaseDomainInterproscan
PF13621Cupin_8Cupin-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020095Homologous_superfamilyPseudouridine synthase I, TruA, C-terminalInterproscan
IPR041708FamilyPseudouridine synthase PUS1/ PUS2-likeInterproscan
IPR001406FamilyPseudouridine synthase I, TruAInterproscan
IPR003347DomainJmjC domainInterproscan
IPR020094Homologous_superfamilyPseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR020097DomainPseudouridine synthase I, TruA, alpha/beta domainInterproscan
IPR041667DomainCupin-like domain 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11142PSEUDOURIDYLATE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0031119Biological ProcesstRNA pseudouridine synthesisInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan

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