Detailed information of evm.model.HiC_scaffold_10.549 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_10:6594820...6601348
NR annotation: XP_004207258.1, uncharacterized protein LOC101241007 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q92794Histone acetyltransferase KAT6A OS=Homo sapiens OX=9606 GN=KAT6A PE=1 SV=2
Q8WML3Histone acetyltransferase KAT6B OS=Macaca fascicularis OX=9541 GN=KAT6B PE=2 SV=1
Q5TKR9Histone acetyltransferase KAT6A OS=Rattus norvegicus OX=10116 GN=Kat6a PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00538Linker_histonelinker histone H1 and H5 familyDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF21524SAMD1_WHSAM domain-containing protein 1, WH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001660DomainSterile alpha motif domainInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR005818DomainLinker histone H1/H5, domain H15Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR048589DomainSAM domain-containing protein 1-like, WH domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45888HL01030P-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22517CBLB; E3 ubiquitin-protein ligase CBL-BEC:2.3.2.27
Ubiquitin systemko04121deepkoala

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