Detailed information of evm.model.HiC_scaffold_111.20 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_111:202011...215442
NR annotation: EDO47200.1, predicted protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9VJY6Large ribosomal subunit protein eL24 OS=Drosophila melanogaster OX=7227 GN=RpL24 PE=1 SV=1
Q5U3S1Katanin p60 ATPase-containing subunit A-like 1 OS=Danio rerio OX=7955 GN=katnal1 PE=2 SV=1
O61577Katanin p60 ATPase-containing subunit A1 OS=Strongylocentrotus purpuratus OX=7668 GN=KATNA1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|ZnF_A20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01246Ribosomal_L24eRibosomal protein L24eDomainInterproscan
PF21126KATNA1_MITKatanin p60 subunit A1, MIT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002653DomainZinc finger, A20-typeInterproscan
IPR011017DomainTRASH domainInterproscan
IPR000988FamilyLarge ribosomal subunit protein eL24-relatedInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048611DomainKatanin p60 ATPase-containing subunit A1, MIT domainInterproscan
IPR038630Homologous_superfamilyRibosomal protein L24e/L24 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1079260S RIBOSOMAL PROTEIN L24Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0002181Biological Processcytoplasmic translationInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan

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