Gene detail

Detailed information of evm.model.HiC_scaffold_1126.1 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1126:2489...6094
NR annotation: WP_224894473.1, matrixin family metalloprotease [Halobacillus halophilus]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P13943	Interstitial collagenase OS=Oryctolagus cuniculus OX=9986 GN=MMP1 PE=2 SV=1
Q28397	Stromelysin-1 OS=Equus caballus OX=9796 GN=MMP3 PE=2 SV=1
P03956	Interstitial collagenase OS=Homo sapiens OX=9606 GN=MMP1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00413	Peptidase_M10	Matrixin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR033739	Domain	Peptidase M10A, catalytic domain	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR036365	Homologous_superfamily	PGBD-like superfamily	Interproscan
IPR021190	Family	Peptidase M10A	Interproscan
IPR001818	Domain	Peptidase M10, metallopeptidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10201	MATRIX METALLOPROTEINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0030574	Biological Process	collagen catabolic process	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan