Detailed information of evm.model.HiC_scaffold_119.50 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_119:639429...695400
NR annotation: XP_020618461.1, GTP-binding protein 2-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3UJK4GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Gtpbp2 PE=1 SV=1
Q9BX10GTP-binding protein 2 OS=Homo sapiens OX=9606 GN=GTPBP2 PE=1 SV=1
D2XV59GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR050897FamilySMAUG/VTS1 RNA-bindingInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR037093Homologous_superfamilySmaug, PHAT domain superfamilyInterproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR037634DomainProtein Smaug, SAM domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12515STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0030371Molecular Functiontranslation repressor activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0043488Biological Processregulation of mRNA stabilityInterproscan

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