Detailed information of evm.model.HiC_scaffold_12.133 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_12:1220991...1253467
NR annotation: XP_048583467.1, elongator complex protein 1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2TAQ1Putative elongator complex protein 1 OS=Xenopus laevis OX=8355 GN=elp1 PE=2 SV=1
O95163Elongator complex protein 1 OS=Homo sapiens OX=9606 GN=ELP1 PE=1 SV=3
Q8WND5Elongator complex protein 1 OS=Oryctolagus cuniculus OX=9986 GN=ELP1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04762IKI3IKI3 familyRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR006849FamilyElongator complex protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12747ELONGATOR COMPLEX PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0002926Biological ProcesstRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0033588Cellular Componentelongator holoenzyme complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11373ELP1, IKI3, IKBKAP; elongator complex protein 1-Transfer RNA biogenesisko03016deepkoala

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