Detailed information of evm.model.HiC_scaffold_12.147 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_12:1390985...1405962
NR annotation: XP_047139557.1, amyloid-beta A4 precursor protein-binding family A member 2 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O17583Protein lin-10 OS=Caenorhabditis elegans OX=6239 GN=lin-10 PE=1 SV=1
P98084Amyloid-beta A4 precursor protein-binding family A member 2 OS=Mus musculus OX=10090 GN=Apba2 PE=1 SV=2
Q99767Amyloid-beta A4 precursor protein-binding family A member 2 OS=Homo sapiens OX=9606 GN=APBA2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF00640PIDPhosphotyrosine interaction domain (PTB/PID)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR006020DomainPTB/PI domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR051230FamilyAmyloid-beta A4 Precursor Protein-BindingInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12345SYNTENIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0043197Cellular Componentdendritic spineInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20055APBA2, X11L; amyloid beta A4 precursor protein-binding family A member 2-Membrane traffickingko04131deepkoala

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