Detailed information of evm.model.HiC_scaffold_1206.1 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1206:1542...7655
NR annotation: CAB4017531.1, syndetin isoform X2, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96JG6Syndetin OS=Homo sapiens OX=9606 GN=VPS50 PE=1 SV=3
Q8CI71Syndetin OS=Mus musculus OX=10090 GN=Vps50 PE=1 SV=2
F1LSG8Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10475Vps54_NVacuolar-sorting protein 54, of GARP complex RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040047FamilySyndetinInterproscan
IPR019515DomainVacuolar protein sorting-associated protein 54, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13258UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:1990745Cellular ComponentEARP complexInterproscan

TOP