Detailed information of evm.model.HiC_scaffold_121.5 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_121:28452...35055
NR annotation: XP_014916696.1, PREDICTED: sodium/calcium exchanger 1 isoform X1 [Poecilia latipinna]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q01728Sodium/calcium exchanger 1 OS=Rattus norvegicus OX=10116 GN=Slc8a1 PE=1 SV=3
P32418Sodium/calcium exchanger 1 OS=Homo sapiens OX=9606 GN=SLC8A1 PE=1 SV=3
P70414Sodium/calcium exchanger 1 OS=Mus musculus OX=10090 GN=Slc8a1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01699Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051171FamilyCalcium/Cation AntiporterInterproscan
IPR004836FamilySodium/calcium exchanger proteinInterproscan
IPR044880Homologous_superfamilyNCX, central ion-binding domain superfamilyInterproscan
IPR004837DomainSodium/calcium exchanger membrane regionInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11878SODIUM/CALCIUM EXCHANGERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005432Molecular Functioncalcium:sodium antiporter activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015491Molecular Functionobsolete cation:cation antiporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030001Biological Processmetal ion transportInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0098794Cellular ComponentpostsynapseInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

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