Detailed information of evm.model.HiC_scaffold_121.6 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_121:50678...72838
NR annotation: EDO49895.1, predicted protein, partial [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9W770Spondin-1 OS=Gallus gallus OX=9031 GN=SPON1 PE=2 SV=1
P35446Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1
Q9HCB6Spondin-1 OS=Homo sapiens OX=9606 GN=SPON1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00335TetraspaninTetraspanin familyFamilyInterproscan
PF06468Spond_NSpondin_NDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR008952Homologous_superfamilyTetraspanin, EC2 domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR038678Homologous_superfamilySpondin, N-terminal domain superfamilyInterproscan
IPR009465DomainSpondin, N-terminalInterproscan
IPR018499FamilyTetraspanin/PeripherinInterproscan
IPR051418FamilySpondin/Thrombospondin type-1 domain-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11311SPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0031532Biological Processobsolete actin cytoskeleton reorganizationInterproscan

TOP