Detailed information of evm.model.HiC_scaffold_13.155 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_13:1440488...1445373
NR annotation: XP_022783299.1, survival motor neuron protein-like isoform X2 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O02771Survival motor neuron protein OS=Canis lupus familiaris OX=9615 GN=SMN1 PE=2 SV=1
P97801Survival motor neuron protein OS=Mus musculus OX=10090 GN=Smn1 PE=1 SV=1
Q4R4F8Survival motor neuron protein OS=Macaca fascicularis OX=9541 GN=SMN1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06003SMN_TudorSurvival motor neuron protein (SMN), Tudor domainDomainInterproscan
PF20636SMN_G2-BDSurvival Motor Neuron, Gemin2-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010304DomainSurvival motor neuron, Tudor domainInterproscan
IPR002999DomainTudor domainInterproscan
IPR040424FamilySMN complex subunit Smn1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR39267SURVIVAL MOTOR NEURON-LIKE PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan

TOP