Detailed information of evm.model.HiC_scaffold_13.254 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_13:2642259...2675366
NR annotation: CAH3144405.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10533Serine/threonine-protein kinase-transforming protein Rmil OS=Avian retrovirus IC10 OX=11874 GN=V-RMIL PE=3 SV=1
P27966Serine/threonine-protein kinase-transforming protein Rmil OS=Avian rous-associated virus type 1 OX=11950 GN=V-RMIL PE=3 SV=1
Q04982Serine/threonine-protein kinase B-raf OS=Gallus gallus OX=9031 GN=BRAF PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14646MYCBPAPMYCBP-associated protein familyFamilyInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF06220zf-U1U1 zinc fingerDomainInterproscan
PF00397WWWW domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR032707FamilyMYCBP-associated proteinInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR036020Homologous_superfamilyWW domain superfamilyInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR000690DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR001202DomainWW domainInterproscan
IPR052822FamilyMYCBP-associatedInterproscan
IPR013085DomainU1-C, C2H2-type zinc fingerInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48333MYCBP-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

TOP