Detailed information of evm.model.HiC_scaffold_13.274 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_13:2820366...2840524
NR annotation: XP_046580371.1, SET and MYND domain-containing protein 4-like [Haliotis rubra]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NH13Exoskeleton protein RP43 OS=Riftia pachyptila OX=6426 PE=1 SV=1
O70244Cubilin OS=Rattus norvegicus OX=10116 GN=Cubn PE=1 SV=2
Q9JLB4Cubilin OS=Mus musculus OX=10090 GN=Cubn PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00431CUBCUB domainDomainInterproscan
PF00856SETSET domainFamilyInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF01753zf-MYNDMYND fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR000859DomainCUB domainInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR001214DomainSET domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR052097FamilySET and MYND domain-containing proteinInterproscan
IPR044421DomainSMYD4, SET domainInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46165SET AND MYND DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0042826Molecular Functionhistone deacetylase bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

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