Detailed information of evm.model.HiC_scaffold_13.288 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_13:2968988...2978896
NR annotation: KXJ19482.1, WD repeat-containing protein 17 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8IZU2WD repeat-containing protein 17 OS=Homo sapiens OX=9606 GN=WDR17 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF10354BMT5-likerRNA (uridine-N3-)-methyltransferase BTM5-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036690Homologous_superfamilyFerrodoxin-fold anticodon-binding domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019446Domain25S rRNA (uridine-N(3))-methyltransferase BMT5-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44464WD REPEAT-CONTAINING PROTEIN 17Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0070042Molecular FunctionrRNA (uridine-N3-)-methyltransferase activityInterproscan
GO:0070475Biological ProcessrRNA base methylationInterproscan

TOP