Detailed information of evm.model.HiC_scaffold_13.396 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_13:4295529...4319198
NR annotation: CAH3126967.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91W89Alpha-mannosidase 2C1 OS=Mus musculus OX=10090 GN=Man2c1 PE=1 SV=1
Q9NTJ4Alpha-mannosidase 2C1 OS=Homo sapiens OX=9606 GN=MAN2C1 PE=1 SV=1
P21139Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01074Glyco_hydro_38NGlycosyl hydrolases family 38 N-terminal domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF07748Glyco_hydro_38CGlycosyl hydrolases family 38 C-terminal domainDomainInterproscan
PF17677Glyco_hydro38C2Glycosyl hydrolases family 38 C-terminal beta sandwich domainDomainInterproscan
PF09261Alpha-mann_midAlpha mannosidase middle domainDomainInterproscan
PF07744SPOCSPOC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR015341DomainGlycoside hydrolase family 38, central domainInterproscan
IPR011330Homologous_superfamilyGlycoside hydrolase/deacetylase, beta/alpha-barrelInterproscan
IPR010912DomainSpen paralogue/orthologue C-terminal, metazoaInterproscan
IPR000602DomainGlycoside hydrolase family 38, N-terminal domainInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR016194Homologous_superfamilySPOC-like, C-terminal domain superfamilyInterproscan
IPR011682DomainGlycosyl hydrolase family 38, C-terminalInterproscan
IPR041147DomainGlycosyl hydrolases family 38, C-terminal beta sandwich domainInterproscan
IPR037094Homologous_superfamilyGlycoside hydrolase family 38, central domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR027291Homologous_superfamilyGlycoside hydrolase 38, N-terminal domain superfamilyInterproscan
IPR028995Homologous_superfamilyGlycoside hydrolase families 57/38, central domain superfamilyInterproscan
IPR012921DomainSpen paralogue and orthologue SPOC, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46017ALPHA-MANNOSIDASE 2C1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004559Molecular Functionalpha-mannosidase activityInterproscan
GO:0009313Biological Processoligosaccharide catabolic processInterproscan
GO:0006013Biological Processmannose metabolic processInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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