Detailed information of evm.model.HiC_scaffold_13.405 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_13:4429320...4438688
NR annotation: XP_047146569.1, uncharacterized protein LOC101236754 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
D3ZGB1Nuclear factor of activated T-cells 5 OS=Rattus norvegicus OX=10116 GN=Nfat5 PE=1 SV=1
Q9WV30Nuclear factor of activated T-cells 5 OS=Mus musculus OX=10090 GN=Nfat5 PE=1 SV=2
O94916Nuclear factor of activated T-cells 5 OS=Homo sapiens OX=9606 GN=NFAT5 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyRHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00554RHD_DNA_bindRel homology DNA-binding domainDomainInterproscan
PF16179RHD_dimerRel homology dimerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008366FamilyNuclear factor of activated T cells (NFAT)Interproscan
IPR037059Homologous_superfamilyRel homology domain (RHD), DNA-binding domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR011539DomainRel homology domain, DNA-binding domainInterproscan
IPR032397DomainRel homology dimerisation domainInterproscan
IPR002909DomainIPT domainInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12533NFATInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17335NFAT5; nuclear factor of activated T-cells 5-Transcription factorsko03000deepkoala

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