Gene detail

Detailed information of evm.model.HiC_scaffold_13.481 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_13:5324276...5325174
NR annotation: KAI1710205.1, core histone h2A/H2B/H3/H4 domain-containing protein [Ditylenchus destructor]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P0DPK5	Histone H3.X OS=Homo sapiens OX=9606 GN=H3Y2 PE=1 SV=1
O15819	Histone H3.3 type a OS=Dictyostelium discoideum OX=44689 GN=H3a PE=1 SV=1
Q7RXR3	Histone H3-like centromeric protein hH3v OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=hH3v PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00125	Histone	Core histone H2A/H2B/H3/H4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000164	Family	Histone H3/CENP-A	Interproscan
IPR009072	Homologous_superfamily	Histone-fold	Interproscan
IPR007125	Domain	Histone H2A/H2B/H3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11426	HISTONE H3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000786	Cellular Component	nucleosome	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0030527	Molecular Function	structural constituent of chromatin	Interproscan
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11253	H3; histone H3	-	Exosome	ko04147	deepkoala