Detailed information of evm.model.HiC_scaffold_13.488 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_13:5392730...5413138
NR annotation: KAJ7379530.1, hypothetical protein OS493_015321 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5TTP0WD repeat-containing protein on Y chromosome OS=Anopheles gambiae OX=7165 GN=WDY PE=4 SV=4
B7FF09WD repeat-containing protein on Y chromosome OS=Drosophila willistoni OX=7260 GN=WDY PE=4 SV=1
B7FF06WD repeat-containing protein on Y chromosome OS=Drosophila grimshawi OX=7222 GN=WDY PE=4 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR051242FamilyWD repeat and EF-hand domain-containing proteinInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44324WD40 REPEAT DOMAIN 95Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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