Gene detail

Detailed information of evm.model.HiC_scaffold_1377.1 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_1377:952...4800
NR annotation: XP_002153846.1, zinc finger RNA-binding protein [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5U231	Zinc finger RNA-binding protein OS=Xenopus tropicalis OX=8364 GN=zfr PE=2 SV=1
Q6GPM1	Zinc finger RNA-binding protein OS=Xenopus laevis OX=8355 GN=zfr PE=2 SV=1
Q96KR1	Zinc finger RNA-binding protein OS=Homo sapiens OX=9606 GN=ZFR PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12874	zf-met	Zinc-finger of C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR003604	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45762	ZINC FINGER RNA-BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003725	Molecular Function	double-stranded RNA binding	Interproscan
GO:0003727	Molecular Function	single-stranded RNA binding	Interproscan
GO:0071011	Cellular Component	precatalytic spliceosome	Interproscan