Gene detail

Detailed information of evm.model.HiC_scaffold_139.9 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_139:77551...81534
NR annotation: CAD7268087.1, unnamed protein product, partial [Timema shepardi]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A0A0R4IC37	Cleavage and polyadenylation specificity factor subunit 1 OS=Danio rerio OX=7955 GN=cpsf1 PE=3 SV=2
Q9EPU4	Cleavage and polyadenylation specificity factor subunit 1 OS=Mus musculus OX=10090 GN=Cpsf1 PE=1 SV=1
Q10570	Cleavage and polyadenylation specificity factor subunit 1 OS=Homo sapiens OX=9606 GN=CPSF1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00752	XPG_N	XPG N-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR006085	Domain	XPG, N-terminal	Interproscan
IPR006084	Family	XPG/Rad2 endonuclease	Interproscan
IPR029060	Homologous_superfamily	PIN-like domain superfamily	Interproscan
IPR019974	Conserved_site	XPG conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11081	FLAP ENDONUCLEASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0017108	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan